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Help with porting GENESIS wanted



Porting-Folk,

I would like to get some assistance with porting GENESIS to OS X (through XDarwin). GENESIS stands for GEneral NEural SImulation System and it is a freeware modeling environment for neural networks, individual neurons, and has kinetic modelling tools to study biochemical and transduction pathways and their interactions. It is used throughout the world for both teaching and for publication quality research.

Awhile back, Gary Thomas made a patch so that it compiles for mklinux and LinuxPPC, and more recently a partial patch by Alfonso Delgado-Reyes will get a very minimal genesis up and working on OS X. I would be happy to send both patches and the make.out file with the warnings and errors to anyone interested, or I can whip up a webpage where they can be downloaded. I also have some correspondence with Alfonso where he has identified potential reasons why it will not do the full compilation.

This would be a great service to the computational neuroscience community and would allow mac people to avoid making LinuxPPC partitions or <gasp> using PCs to run Genesis.

The official website for genesis is http://www.genesis-sim.org/GENESIS/
and all of the files are available there.

Hope to hear from some of you.

Sincerely,

Serapio
__

Serapio M. Baca
UCSD Neurosciences
email@hidden

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